5/30/2023 0 Comments Kitty kubes![]() ![]() Samples were sorted into groups (from left to the right, for sample description see Materials and Methods): root tissues: root_d7, root_d17, root_endodermis, root_stele, root_xylem, root_columella, root_cortex, root_epidermis, root_ground_tissue, root_protophloem, lateral_root_cap, root_artrichobast, root_pericycle, root_companion_cell vegetative tissues: seedling, cotyledon, hypocotyl, young_leaf, early_rosette, leaf, mature leaf, petiole, whole_plant, senescent_leaf, shoot, internode_shoot, cauline_leaf, inflor_shoot meristem: Meristem_Clavata3 1, Meristem_Fil flower and inflorescence: pedicel, flower_st6, flower_st9, flower_st11, flower_st12, flower_st15, sepal, sepal_st15, petal, petal_st15, stamen, stamen_st15 reproduction: pollen_Schmid, pollen_Borges, sperm, carpel, carpel_st15, early_ovules, late_ovules, sporo_nucellus1, megaspore_mothercell1, synergid_cell, egg_cell, central_cell, embryo_proper_globEmb, glob_embryo_apical, glob_embryo_basal, heart_embryo_cot, heart_embryo_root, peripheral_endosperm_globEmb, micropylar_endosperm_globEmb, chalazal_endosperm_globEmb, seed_coat_globEmb, silique_glob_emb, silique_heart_emb, silique_triang_emb, seed_torpedo, seed_walk_stick, seed_early_curl_cot, seed_early_green_cot, seed_green_cot1.įigure S6: Phenotypic analysis of mem-1 and mem-2 mutant plants during megagametogenesis. Red box: MMC, PDI (PROTEIN DISULFIT ISOMERASE), PRL (PLEIOTROPIC REGULATORY LOCUS). Colors are scaled per row and yellow denotes high expression and blue low expression. Hierarchical clustering of all samples included in the tissue atlas (see Methods) was based on euclidean distance and hierarchical agglomerative clustering. ![]() ![]() Figure S1: Heatmap of expression values for genes in term “embryonic development.” Heatmap of log2 transformed mean expression values for genes significantly enriched in the MMC as compared to the mature gametophyte at a false discovery rate below 5% annotated in “GO:0009790: embryonic development.” This includes a number of genes previously identified as MATERNAL EFFECT EMBRYO ARREST ( MEE) and EMBRYO DEFECTIVE ( EMB), –. ![]()
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